Protein

Protein Id:  YP_009883077.1 Length:   211 aa
Description:   spike protein Escherichia phage vB_EcoM-12474III. Molecule type:   linear
Data category:   PHG Date:   3-Jul-20
Source:   Escherichia phage vB_EcoM-12474III
Class virus:   phage Virus name:   Escherichia phage
Host:   Escherichia coli DSM 12242 Authors:   Pacifico;C.; Hilbert;M.; Sofka;D.; Dinhopl;N.; Pap;I.-J.; Aspoeck;C.; Carrico;J.A. and Hilbert;F.
Title:   Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Journal:   Front Microbiol 10; 2484 (2019)
Taxonomy:   Escherichia phage vB_EcoM-12474III Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus; unclassified Peduovirus.
db_xref:   """taxon:2576484, CDD:273729, GeneID:55812394"""
Sequence:   MNTLANIQELARALRNMIRTGIIVETDLNAGRCRVQTGGMCTDWLQWLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSGDNPAPSASADALHIRFPDGAVIEYEPETSALTASGIKTASVTASDSVTATVPVVMVKASTRVTLDTPEVVCTNRLITGTLEVQKGGTMRGNIEHTGGELSSNGKVLHTHKHPGDSGGTTGSPL

Nucleotide

Nucleotide_Id:  NC_049457.1 Length:   636bp
Description:   Escherichia phage vB_EcoM-12474III; complete genome Source:   Escherichia phage vB_EcoM-12474III
Nucleotide_type:   DNA Molecule type:   linear
Data category:   PHG Date:   3-Jul-20
Class virus:   phage Virus name:   Escherichia phage
CDS:   complement(NC_049457.1:27558..28193) Host:   Escherichia coli DSM 12242
Authors:   Pacifico;C.; Hilbert;M.; Sofka;D.; Dinhopl;N.; Pap;I.-J.; Aspoeck;C.; Carrico;J.A. and Hilbert;F. Journal:   Front Microbiol 10; 2484 (2019)
Title:   Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples db_xref:   taxon:2576484; GeneID:55812407; GeneID:55812407; GeneID:55812364; GeneID:55812364; GeneID:55812365; GeneID:55812365; GeneID:55812366; GeneID:55812366; GeneID:55812367; GeneID:55812367; GeneID:55812368; GeneID:55812368; GeneID:55812369; GeneID:55812369; GeneID:55812370; GeneID:55812370; GeneID:55812371; GeneID:55812371; GeneID:55812372; GeneID:55812372; GeneID:55812373; GeneID:55812373; GeneID:55812374; GeneID:55812374; GeneID:55812375; GeneID:55812375; GeneID:55812376; GeneID:55812376; GeneID:55812377; GeneID:55812377; GeneID:55812378; GeneID:55812378; GeneID:55812379; GeneID:55812379; GeneID:55812380; GeneID:55812380; GeneID:55812381; GeneID:55812381; GeneID:55812382; GeneID:55812382; GeneID:55812383; GeneID:55812383; GeneID:55812384; GeneID:55812384; GeneID:55812385; GeneID:55812385; GeneID:55812386; GeneID:55812386; GeneID:55812387; GeneID:55812387; GeneID:55812388; GeneID:55812388; GeneID:55812389; GeneID:55812389; GeneID:55812390; GeneID:55812390; GeneID:55812391; GeneID:55812391; GeneID:55812392; GeneID:55812392; GeneID:55812393; GeneID:55812393; GeneID:55812394; GeneID:55812394; GeneID:55812395; GeneID:55812395; GeneID:55812396; GeneID:55812396; GeneID:55812397; GeneID:55812397; GeneID:55812398; GeneID:55812398; GeneID:55812399; GeneID:55812399; GeneID:55812400; GeneID:55812400; GeneID:55812401; GeneID:55812401; GeneID:55812402; GeneID:55812402; GeneID:55812403; GeneID:55812403; GeneID:55812404; GeneID:55812404; GeneID:55812405; GeneID:55812405; GeneID:55812406; GeneID:55812406
Taxonomy:   Escherichia phage vB_EcoM-12474III Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus; unclassified Peduovirus.
Features:   SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(33807); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(799); ExactPosition(1654); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(799); ExactPosition(1654); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(1827); ExactPosition(3600); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(1827); ExactPosition(3600); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3599); ExactPosition(4634); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3599); ExactPosition(4634); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5008); ExactPosition(6127); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5008); ExactPosition(6127); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6113); ExactPosition(7106); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6113); ExactPosition(7106); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7106); ExactPosition(8045); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(7106); ExactPosition(8045); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8296); ExactPosition(8530); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8296); ExactPosition(8530); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8529); ExactPosition(8982); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8529); ExactPosition(8982); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8960); ExactPosition(11267); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8960); ExactPosition(11267); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11256); ExactPosition(11532); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(11256); ExactPosition(11532); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11528); ExactPosition(11753); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(11528); ExactPosition(11753); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11755); ExactPosition(12055); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(11755); ExactPosition(12055); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12054); ExactPosition(12279); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12054); ExactPosition(12279); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12342); ExactPosition(12843); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12342); ExactPosition(12843); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12839); ExactPosition(13037); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12839); ExactPosition(13037); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13012); ExactPosition(13285); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13012); ExactPosition(13285); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13437); ExactPosition(13731); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13437); ExactPosition(13731); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13800); ExactPosition(14781); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13800); ExactPosition(14781); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15053); ExactPosition(15353); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15053); ExactPosition(15353); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15352); ExactPosition(16516); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15352); ExactPosition(16516); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(16515); ExactPosition(16995); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(16515); ExactPosition(16995); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(17009); ExactPosition(19457); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(17009); ExactPosition(19457); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(19601); ExactPosition(19877); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(19601); ExactPosition(19877); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(19933); ExactPosition(20452); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(19933); ExactPosition(20452); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20464); ExactPosition(21655); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20464); ExactPosition(21655); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(21973); ExactPosition(23056); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(21973); ExactPosition(23056); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23307); ExactPosition(23835); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23307); ExactPosition(23835); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23838); ExactPosition(25767); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23838); ExactPosition(25767); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25777); ExactPosition(26308); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25777); ExactPosition(26308); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26300); ExactPosition(27209); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26300); ExactPosition(27209); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27213); ExactPosition(27561); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(27213); ExactPosition(27561); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27557); ExactPosition(28193); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(27557); ExactPosition(28193); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28276); ExactPosition(29062); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28276); ExactPosition(29062); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(29133); ExactPosition(29586); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(29133); ExactPosition(29586); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(29578); ExactPosition(30046); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(29578); ExactPosition(30046); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(30008); ExactPosition(30167); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(30008); ExactPosition(30167); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(30135); ExactPosition(30579); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(30135); ExactPosition(30579); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(30566); ExactPosition(30992); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(30566); ExactPosition(30992); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(31006); ExactPosition(31504); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(31006); ExactPosition(31504); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(31503); ExactPosition(31785); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(31503); ExactPosition(31785); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(31788); ExactPosition(31992); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(31788); ExactPosition(31992); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(31991); ExactPosition(32501); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(31991); ExactPosition(32501); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(32600); ExactPosition(33344); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(32600); ExactPosition(33344); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(33347); ExactPosition(33779); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(33347); ExactPosition(33779); strand=-1); type='CDS')
Sequence:   TCATAAAGGACTCCCGGTTGTGCCGCCGCTGTCGCCGGGGTGTTTGTGGGTATGCAGTACCTTACCGTTTGATGAGAGTTCACCGCCGGTGTGTTCAATGTTGCCGCGCATCGTCCCGCCCTTCTGTACTTCCAGCGTGCCGGTAATCAGCCTGTTGGTGCAGACCACCTCCGGTGTGTCCAGGGTGACGCGGGTTGATGCTTTCACCATGACCACCGGCACCGTGGCAGTAACAGAATCAGAAGCCGTCACGCTGGCCGTTTTAATTCCGCTTGCCGTGAGTGCACTGGTTTCGGGTTCATATTCAATCACCGCCCCGTCAGGGAAACGGATATGCAGGGCATCCGCCGACGCAGACGGCGCGGGGTTATCGCCGGAATAAATCCCCGGCAGAACGAACGCCGTGTCGAGTTCACCGCCCACGGCCAGAATCAGCACCTGCTCCCCCACGGAAGGTGCCCACCATGTGCGCGAACGACCGGCACGATGGGTCAGCCACTGAAGCCAGTCAGTGCACATGCCGCCGGTCTGCACACGGCAGCGACCGGCGTTAAGGTCGGTTTCGACGATAATGCCGGTGCGAATCATGTTGCGCAGTGCGCGCGCGAGTTCCTGAATATTTGCGAGAGTGTTCAT