Protein

Protein Id:  YP_009788015.1 Length:   253 aa
Description:   tail spike Pseudoalteromonas phage C5a. Molecule type:   linear
Data category:   PHG Date:   29-Jun-20
Source:   Pseudoalteromonas phage C5a
Class virus:   phage Virus name:   Pseudoalteromonas phage
Host:   Pseudoalteromonas sp. RHS-str. 402 Authors:   Lara;E.; Vaque;D.; Sa;E.L.; Salazar;G.; Sanchez;P.; Duhaime;M.B.; Ignacio-Espinoza;J.; Santos;F.; Roux;S.; Anton;J.; Sullivan;M.B. and Acinas;S.G.
Title:   An insight into ecological interactions; comparative genomics and biogeography of Pseudoalteromonas phages Journal:   Unpublished
Taxonomy:   Pseudoalteromonas phage C5a Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Catalunyavirus; Pseudoalteromonas virus C5a.
db_xref:   """taxon:1916107, GeneID:54978132"""
Sequence:   MDKSIQRIVRRQFPELTGQLHLPRWGRVVALPELPTDDGERGSDAFYPRYAVNVQLIDENGTDTKSKPLQAVPLPLPGAGDKAGRLEPPAINSIVEIGFAYGRADKPFIRTVLPFGWDLPAIKEGEIRTQVREGVYQFIDDQGNFENKTDESLKDIIGKLADLQCETRKVIATKEQDHRSPKTWLGSEGENVLKLLSELMATVSALANTCASHTHKGVAAGTAKTQAPEQAGEFSGQASQADEQKGRLDPITK

Nucleotide

Nucleotide_Id:  NC_047790.1 Length:   762bp
Description:   Pseudoalteromonas phage C5a; complete genome Source:   Pseudoalteromonas phage C5a
Nucleotide_type:   DNA Molecule type:   linear
Data category:   PHG Date:   29-Jun-20
Class virus:   phage Virus name:   Pseudoalteromonas phage
CDS:   NC_047790.1:34278..35039 Host:   Pseudoalteromonas sp. RHS-str. 402
Authors:   Lara;E.; Vaque;D.; Sa;E.L.; Salazar;G.; Sanchez;P.; Duhaime;M.B.; Ignacio-Espinoza;J.; Santos;F.; Roux;S.; Anton;J.; Sullivan;M.B. and Acinas;S.G. Journal:   Unpublished
Title:   An insight into ecological interactions; comparative genomics and biogeography of Pseudoalteromonas phages db_xref:   taxon:1916107; GeneID:54978134; GeneID:54978134; GeneID:54978089; GeneID:54978089; GeneID:54978090; GeneID:54978090; GeneID:54978091; GeneID:54978091; GeneID:54978092; GeneID:54978092; GeneID:54978093; GeneID:54978093; GeneID:54978094; GeneID:54978094; GeneID:54978095; GeneID:54978095; GeneID:54978096; GeneID:54978096; GeneID:54978097; GeneID:54978097; GeneID:54978098; GeneID:54978098; GeneID:54978099; GeneID:54978099; GeneID:54978100; GeneID:54978100; GeneID:54978101; GeneID:54978101; GeneID:54978102; GeneID:54978102; GeneID:54978103; GeneID:54978103; GeneID:54978104; GeneID:54978104; GeneID:54978105; GeneID:54978105; GeneID:54978106; GeneID:54978106; GeneID:54978107; GeneID:54978107; GeneID:54978108; GeneID:54978108; GeneID:54978109; GeneID:54978109; GeneID:54978110; GeneID:54978110; GeneID:54978133; GeneID:54978133; GeneID:54978111; GeneID:54978111; GeneID:54978112; GeneID:54978112; GeneID:54978113; GeneID:54978113; GeneID:54978114; GeneID:54978114; GeneID:54978115; GeneID:54978115; GeneID:54978116; GeneID:54978116; GeneID:54978117; GeneID:54978117; GeneID:54978118; GeneID:54978118; GeneID:54978119; GeneID:54978119; GeneID:54978120; GeneID:54978120; GeneID:54978121; GeneID:54978121; GeneID:54978122; GeneID:54978122; GeneID:54978123; GeneID:54978123; GeneID:54978124; GeneID:54978124; GeneID:54978125; GeneID:54978125; GeneID:54978126; GeneID:54978126; GeneID:54978127; GeneID:54978127; GeneID:54978128; GeneID:54978128; GeneID:54978129; GeneID:54978129; GeneID:54978130; GeneID:54978130; GeneID:54978131; GeneID:54978131; GeneID:54978132; GeneID:54978132
Taxonomy:   Pseudoalteromonas phage C5a Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Catalunyavirus; Pseudoalteromonas virus C5a.
Features:   SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(35209); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(376); ExactPosition(784); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(376); ExactPosition(784); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(790); ExactPosition(1648); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(790); ExactPosition(1648); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(2408); ExactPosition(2840); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(2408); ExactPosition(2840); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(2896); ExactPosition(3265); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(2896); ExactPosition(3265); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3579); ExactPosition(3699); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3579); ExactPosition(3699); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3758); ExactPosition(4310); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3758); ExactPosition(4310); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4310); ExactPosition(4655); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(4310); ExactPosition(4655); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4659); ExactPosition(5481); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(4659); ExactPosition(5481); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5508); ExactPosition(5694); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5508); ExactPosition(5694); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6005); ExactPosition(6620); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6005); ExactPosition(6620); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6662); ExactPosition(7127); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6662); ExactPosition(7127); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7319); ExactPosition(7601); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(7319); ExactPosition(7601); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7597); ExactPosition(7852); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(7597); ExactPosition(7852); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7863); ExactPosition(8139); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(7863); ExactPosition(8139); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8141); ExactPosition(8546); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8141); ExactPosition(8546); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8555); ExactPosition(8804); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8555); ExactPosition(8804); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8800); ExactPosition(9397); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8800); ExactPosition(9397); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9415); ExactPosition(9697); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(9415); ExactPosition(9697); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9697); ExactPosition(12838); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(9697); ExactPosition(12838); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12846); ExactPosition(13122); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12846); ExactPosition(13122); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13111); ExactPosition(14536); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13111); ExactPosition(14536); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(14704); ExactPosition(14950); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(14704); ExactPosition(14950); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15112); ExactPosition(15538); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15112); ExactPosition(15538); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15602); ExactPosition(16631); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15602); ExactPosition(16631); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(16612); ExactPosition(18397); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(16612); ExactPosition(18397); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(18676); ExactPosition(19507); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(18676); ExactPosition(19507); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(19561); ExactPosition(20569); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(19561); ExactPosition(20569); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20634); ExactPosition(21162); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20634); ExactPosition(21162); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(21290); ExactPosition(21821); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(21290); ExactPosition(21821); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(21934); ExactPosition(22384); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(21934); ExactPosition(22384); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(22380); ExactPosition(22863); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(22380); ExactPosition(22863); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(22859); ExactPosition(23516); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(22859); ExactPosition(23516); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23520); ExactPosition(24627); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23520); ExactPosition(24627); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24638); ExactPosition(25088); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24638); ExactPosition(25088); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25100); ExactPosition(25301); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25100); ExactPosition(25301); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25305); ExactPosition(25857); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25305); ExactPosition(25857); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25859); ExactPosition(26414); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25859); ExactPosition(26414); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26410); ExactPosition(26656); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26410); ExactPosition(26656); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26659); ExactPosition(26926); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26659); ExactPosition(26926); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27135); ExactPosition(28914); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(27135); ExactPosition(28914); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28910); ExactPosition(29246); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28910); ExactPosition(29246); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(29246); ExactPosition(30437); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(29246); ExactPosition(30437); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(30442); ExactPosition(31000); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(30442); ExactPosition(31000); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(31003); ExactPosition(33088); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(31003); ExactPosition(33088); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(33094); ExactPosition(33586); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(33094); ExactPosition(33586); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(34277); ExactPosition(35039); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(34277); ExactPosition(35039); strand=1); type='CDS')
Sequence:   ATGGATAAATCAATACAAAGAATAGTACGCCGGCAGTTTCCAGAACTAACGGGCCAATTACATTTACCGCGCTGGGGTAGAGTAGTTGCATTGCCTGAACTACCAACTGATGATGGCGAGCGCGGTAGCGATGCATTCTACCCACGCTATGCTGTTAACGTTCAGCTTATTGACGAAAACGGCACAGACACCAAATCAAAACCACTTCAAGCTGTGCCGTTACCATTACCAGGTGCAGGTGATAAAGCAGGCCGATTAGAACCGCCGGCTATTAATTCTATTGTAGAAATTGGCTTTGCTTATGGGCGAGCAGATAAACCATTCATCAGAACAGTATTGCCTTTTGGTTGGGACTTACCTGCAATCAAGGAGGGTGAAATCCGCACACAAGTACGCGAGGGTGTTTATCAGTTCATTGATGATCAAGGCAACTTTGAAAACAAAACAGACGAATCATTAAAAGACATCATCGGCAAATTAGCCGACCTACAATGTGAAACCCGCAAAGTAATAGCAACTAAAGAGCAAGACCACCGAAGCCCAAAAACATGGTTAGGCAGTGAAGGCGAGAACGTACTTAAGTTATTATCAGAGTTAATGGCAACAGTAAGCGCCTTGGCTAACACATGTGCAAGCCACACACACAAGGGCGTAGCAGCAGGAACAGCAAAAACCCAAGCACCAGAACAAGCCGGAGAGTTTAGCGGCCAAGCATCACAAGCCGACGAACAAAAAGGCAGGCTAGACCCAATAACAAAATAG