| Protein Id: ABN47333.1 |
Length: 684 aa |
| Description: tailspike protein Salmonella phage SETP3. |
Molecule type: linear |
| Data category: PHG |
Date: 3-Dec-13 |
| Source: Salmonella phage SETP3 |
| Class virus: phage |
Virus name: Salmonella phage |
| Host: -- |
Authors: De Lappe;N. and Cormican;M. |
| Title: Analysis of Salmonella Enteritidis Typing Phage 3 (SETP3) |
Journal: Unpublished |
| Taxonomy: Salmonella phage SETP3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus. |
| db_xref: """taxon:424944, CDD:286351""" |
| Sequence: MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGADDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTAGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSILIDRDYNFNNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVVAPFMESATTPWVIKPWTDNNEWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKDQNISSVLEIRECTGVEIHRASGLMACFLFRGCHFCRMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDINPEDGRPGDFPYSQYPVHMLPLNHLIDNLLVRGSLGVGLGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAIIDTNTKDFPANQIYISGACRVNGLRLVGIRSTSGQGMTIDAPNSTVSGITGLVDPSRINVANLAEEGLGNSRINSFNSDSAALRLRIHKLSKTLDSGSVYSRINGGPGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVAMTVLPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA |
Nucleotide
| Nucleotide_Id: EF177456.2 |
Length: 2055bp |
| Description: Salmonella phage SETP3; complete genome |
Source: Salmonella phage SETP3 |
| Nucleotide_type: DNA |
Molecule type: linear |
| Data category: PHG |
Date: 3-Dec-13 |
| Class virus: phage |
Virus name: Salmonella phage |
| CDS: EF177456.2:22397..24451 |
Host: -- |
| Authors: De Lappe;N. and Cormican;M. |
Journal: Unpublished |
| Title: Analysis of Salmonella Enteritidis Typing Phage 3 (SETP3) |
db_xref: taxon:424944 |
| Taxonomy: Salmonella phage SETP3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(42572); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(546); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(535); ExactPosition(1807); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(1819); ExactPosition(3289); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3318); ExactPosition(3969); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4000); ExactPosition(4030); strand=-1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(4145); ExactPosition(5189); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5191); ExactPosition(5650); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5968); ExactPosition(6358); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6200); ExactPosition(6464); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6542); ExactPosition(7250); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7253); ExactPosition(8303); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8318); ExactPosition(8648); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8659); ExactPosition(9010); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9046); ExactPosition(9235); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9238); ExactPosition(9748); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9750); ExactPosition(10356); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10355); ExactPosition(10715); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10711); ExactPosition(11107); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11106); ExactPosition(11526); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11525); ExactPosition(12695); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12705); ExactPosition(12729); strand=1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(12727); ExactPosition(13399); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13511); ExactPosition(13742); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13811); ExactPosition(14966); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15028); ExactPosition(15208); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15242); ExactPosition(15271); strand=-1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(15377); ExactPosition(15794); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15820); ExactPosition(16156); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(16133); ExactPosition(18458); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(18459); ExactPosition(18960); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(18956); ExactPosition(19472); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(19468); ExactPosition(19834); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(19824); ExactPosition(20646); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20638); ExactPosition(22384); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(22396); ExactPosition(24451); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24447); ExactPosition(24475); strand=1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(24459); ExactPosition(24484); strand=1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(24569); ExactPosition(24740); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24736); ExactPosition(27202); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27198); ExactPosition(27390); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27421); ExactPosition(27709); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27698); ExactPosition(28196); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28399); ExactPosition(31498); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(31555); ExactPosition(32182); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(32241); ExactPosition(32267); strand=-1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(32263); ExactPosition(32440); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(32436); ExactPosition(33864); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(33905); ExactPosition(34442); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(34575); ExactPosition(34794); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(34785); ExactPosition(34810); strand=1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(34808); ExactPosition(36995); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(37051); ExactPosition(37285); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(37281); ExactPosition(37452); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(37483); ExactPosition(37512); strand=1); type='regulatory'); SeqFeature(FeatureLocation(ExactPosition(37909); ExactPosition(38113); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(38119); ExactPosition(38386); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(38491); ExactPosition(38599); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(38793); ExactPosition(38958); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(39020); ExactPosition(39224); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(39226); ExactPosition(39604); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(39682); ExactPosition(39964); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(39965); ExactPosition(40253); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(40233); ExactPosition(40722); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(40906); ExactPosition(41083); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(41079); ExactPosition(41238); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(41234); ExactPosition(41390); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(41386); ExactPosition(41569); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(41565); ExactPosition(41715); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(41711); ExactPosition(41936); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(41935); ExactPosition(42235); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(42248); ExactPosition(42479); strand=1); type='CDS') |
| Sequence: ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGCGGTGTAGCTGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGATGCTGGTTTCTCCCCAGCATCTTTCAACTTCACAACCGGCGGGACCCTGGGGGCTGACGACGCGGATAAAGCGGTTCTTTGGCCGAAAGAAGATGGTGGAGACGGTAACTACTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCGGCGGCGTCGACACCTCTTACGGCAGGCGGCATTTCGGATTCCGCCTGGGTCGCGTTCGGGGATATCACCTTCCGTGCCGAAGCAGATAAGAAATTTAAATACTCCGTTAAGTTGTCGGATTTTACCACTTTACAGCAATTGGCCGACGCTGCCGTCGACAGTATTCTTATCGACCGTGACTACAATTTCAACAATAACGAAACCGTTAATTTTGGCGGTAAGACCCTAACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATCGTAGTAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATAAAACCCTGGACTGACAATAATGAGTGGATAACCGACCCCGCTGCGATTGTAGCAACACTGAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTATGCCAAGTTTCCAGGTATAGAATCACTCCTCCCTCCGGAAGCTAAAGACCAAAACATTTCATCTGTCCTTGAGATACGGGAATGTACAGGCGTCGAGATTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGTGGATGCCATTTCTGTAGGATGGTAGACGCCGATAACCCCAGCGGCGGGAAGGACGGCGTAATCACCTTCGAAAATTTAAGCGGCGATTGGGGTAAGGGGAACTATGTTATTGGTGGCCGCACGAGTTACGGCTCAGTAAGTAGCGCGCAATTTTTACGTAACAATGGTGGTTTCGCGCGAGATGGTGGGGTCATAGGATTTACCTCGTATCGCGCGGGGGAAAGTGGTGTTAAAACATGGCAAGGTACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCTGCGGTACTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATAAACCCAGAAGATGGCCGCCCGGGGGATTTCCCATATTCCCAATACCCGGTACATATGCTCCCTCTAAACCATTTAATTGACAATCTACTGGTTAGGGGTTCTTTGGGGGTAGGTTTAGGCATGGACGGGCAGGGCCTATATGTTTCAAATATAACTGTAGAGGATTGTGCAGGTTCGGGTGCGTATCTTCTTACTCATGAAACGGTATTCACTAATATTGCTATAATCGACACAAATACTAAAGATTTTCCAGCGAATCAGATATACATCTCCGGGGCCTGCCGTGTAAATGGCCTTCGTTTGGTAGGCATACGCTCCACTAGTGGGCAGGGGATGACGATAGACGCTCCTAACTCCACTGTAAGCGGTATAACAGGTCTCGTTGACCCGTCAAGAATCAATGTGGCCAATTTAGCGGAGGAAGGTCTAGGAAACTCACGAATTAATAGTTTTAATAGCGATTCTGCGGCGCTGCGGTTACGGATACATAAACTGTCAAAAACCCTTGATAGTGGGTCCGTGTACTCCCGCATTAACGGCGGGCCAGGTTCTGGTTCAGCATGGACCGAAATTACTGCTATTGCGGGGAGCTTGCCCGATGCCGTGTCATTAAAAATAAATAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGATGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGTCTATATCACTGTATCTGGAGGGCGATAGCCTTAAAGCGTTAGTTAAGCGGGCCGACGGAAGCTATACAAGATTAACTTTGGCATAA |