| Protein Id: YP_392514.1 |
Length: 744 aa |
| Description: outer capsid spike protein Rotavirus C. |
Molecule type: linear |
| Data category: VRL |
Date: 13-Aug-18 |
| Source: Rotavirus C |
| Class virus: rotavirus |
Virus name: Rotavirus C |
| Host: Escherichia coli |
Authors: Fielding;P.A.; Lambden;P.R.; Caul;E.O. and Clarke;I.N. |
| Title: Molecular characterization of the outer capsid spike protein (VP4) gene from human group C rotavirus |
Journal: Virology 204 (1); 442-446 (1994) |
| Taxonomy: Rotavirus C Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae; Rotavirus. |
| db_xref: """taxon:36427, CDD:189541, GOA:Q82040, InterPro:IPR000416, InterPro:IPR008935, UniProtKB/TrEMBL:Q82040, GeneID:3773132""" |
| Sequence: MASSLYAQLISQNYYSLGNEILSDQQTNKVVSDYVDAGNYTYAQLPPTTWGSGSILKSAFSTPEITGPHTNTVIEWSNLINTNTWLLYQKPLNSVRLLKHGPDTYNSNLAAFELWYGKSGTTITSVYYNTINNQNKTHDANSDCLILFWNEGSTQLEKQVVTFNWNVGGILIKPINSSRMRICMSGMENFNNDSFNWENWNHEFPRSNPGININMYTEYFLASSDPYTYLKNLQQPTAKTVDMKMMKKMNDNSKLGDGPINVSNIISKDSLWQEVQYVRDITLQCKILSEIVKGGGWGYDYTSVTFKTVNHTYSYTRAGENVNAHVTISFNNVKERAYGGSLPTDFKIGRFDILDTDSYVYIDYWDDSEIFKNMVYVRDVRADIGGFQYSYSSEMSYYFQIPVGSYPGLHSSRLQLVYDRCLLSQQFTDYAALNSLRFVFRVVSTSGWFITTGDINTRRVASGTGFAYSDGHVANTVGTISFISLIPSNPNYQTPIASSSTVRMDLERKINDLRDDFNALASSVALSDILSLAMSPLTFSNLLESVPAITSSVKDVAASVMKKFRSTKMFKKAAKQNYREFVIGDLLEDVTNVARNNNSLNYSDITSAMMVSTTNRLQITDVDTFSEIVSRSADNFISNRSYRMIENNTVHEITPTRRFSYDIKTLQQRNFDIDKFSKLASQSPVISAIVDFATIKAIRDTYGISDDIIYKLVASDAPTILSFINQNNPLIRNRITNLINQCKL |
Nucleotide
| Nucleotide_Id: NC_007572.1 |
Length: 2235bp |
| Description: Rotavirus C segment 3; complete sequence |
Source: Rotavirus C |
| Nucleotide_type: ds-RNA |
Molecule type: linear |
| Data category: VRL |
Date: 13-Aug-18 |
| Class virus: rotavirus |
Virus name: Rotavirus C |
| CDS: NC_007572.1:21..2255 |
Host: Escherichia coli |
| Authors: Fielding;P.A.; Lambden;P.R.; Caul;E.O. and Clarke;I.N. |
Journal: Virology 204 (1); 442-446 (1994) |
| Title: Molecular characterization of the outer capsid spike protein (VP4) gene from human group C rotavirus |
db_xref: taxon:36427; GeneID:3773132; GOA:Q82040; InterPro:IPR000416; InterPro:IPR008935; UniProtKB/TrEMBL:Q82040; GeneID:3773132 |
| Taxonomy: Rotavirus C Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae; Rotavirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(2283); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(20); ExactPosition(2255); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20); ExactPosition(2255); strand=1); type='CDS') |
| Sequence: ATGGCGTCTTCACTGTACGCACAATTAATCTCACAAAATTACTATTCTCTAGGAAATGAAATTTTATCTGATCAACAAACTAATAAAGTGGTATCAGACTATGTGGATGCAGGAAACTACACCTATGCTCAATTGCCACCTACAACGTGGGGATCTGGGTCAATACTTAAATCGGCATTCTCTACACCTGAAATAACTGGACCACATACGAATACAGTAATTGAATGGAGTAACTTAATAAATACTAATACTTGGCTGTTATATCAGAAACCATTAAATTCAGTTAGATTATTAAAGCATGGTCCAGACACTTATAACAGCAATCTAGCAGCATTTGAGCTATGGTATGGAAAATCTGGAACTACTATAACATCCGTATATTATAACACTATCAATAACCAAAATAAGACGCATGATGCTAATTCAGATTGTTTAATTTTATTTTGGAACGAGGGATCTACACAGTTAGAAAAACAAGTCGTAACATTCAACTGGAACGTGGGTGGTATACTAATTAAACCAATAAATTCAAGTAGAATGAGAATTTGCATGTCAGGAATGGAAAATTTTAATAATGATTCATTTAATTGGGAAAATTGGAATCACGAGTTTCCAAGAAGTAATCCTGGTATTAATATTAATATGTATACTGAGTATTTTCTGGCAAGTAGTGATCCATATACATATCTTAAAAATTTACAACAGCCAACAGCTAAAACTGTAGACATGAAAATGATGAAAAAGATGAATGATAACTCAAAATTAGGGGATGGTCCTATTAATGTTAGTAATATTATTAGTAAGGACTCATTGTGGCAAGAAGTTCAATACGTACGTGATATAACTTTGCAATGTAAAATATTATCTGAAATTGTGAAAGGTGGAGGATGGGGATATGACTATACTAGTGTAACGTTTAAAACAGTTAATCATACATATTCATACACTAGAGCAGGAGAAAATGTTAATGCTCATGTGACTATAAGTTTCAATAATGTAAAAGAACGAGCATATGGAGGATCACTGCCTACTGATTTTAAAATTGGTAGATTTGATATACTCGATACTGATTCATATGTATATATTGATTATTGGGATGATTCAGAAATATTTAAAAATATGGTATATGTTCGCGATGTACGAGCGGATATAGGAGGATTTCAGTATTCTTATTCGTCAGAGATGTCATATTATTTTCAGATACCTGTAGGATCATATCCTGGATTACATTCATCAAGGTTGCAACTTGTTTATGATAGATGTTTATTATCTCAACAATTTACTGATTATGCAGCTTTGAATTCGTTAAGATTCGTATTCAGAGTAGTTTCGACTAGTGGATGGTTCATTACAACAGGAGATATAAATACTAGAAGAGTAGCATCAGGGACAGGATTTGCTTATTCAGACGGTCATGTAGCTAATACAGTTGGAACTATTTCATTTATTTCTTTAATACCAAGTAATCCGAACTACCAAACTCCAATAGCTTCATCTAGTACTGTAAGAATGGATTTAGAGAGAAAAATCAATGATTTACGTGATGACTTCAATGCTTTAGCGAGTTCAGTTGCATTAAGTGATATACTTTCCCTCGCTATGTCACCATTAACATTTTCTAATCTATTAGAATCAGTTCCGGCTATTACTTCATCGGTTAAGGATGTTGCTGCTAGTGTTATGAAAAAATTTAGAAGTACTAAAATGTTCAAAAAAGCAGCAAAACAAAATTATCGGGAGTTTGTCATTGGAGACTTATTGGAAGACGTTACTAATGTTGCTAGGAATAATAATTCGTTGAACTATAGTGATATTACTTCGGCCATGATGGTTTCAACTACTAACAGATTACAAATTACTGATGTAGATACTTTTTCAGAAATAGTATCACGATCAGCTGACAATTTTATTTCAAATAGATCTTATAGAATGATAGAAAATAATACTGTTCATGAAATAACGCCTACAAGAAGATTTTCATATGACATTAAAACCTTACAGCAACGAAATTTCGACATAGATAAATTCTCTAAACTAGCTTCTCAATCTCCCGTTATATCTGCAATAGTTGATTTTGCTACCATAAAAGCAATACGTGATACTTATGGCATTAGTGATGATATCATATACAAATTAGTGGCATCTGACGCTCCTACTATTTTGTCATTTATTAATCAGAATAATCCACTCATACGGAATAGAATTACTAATCTAATAAATCAATGCAAATTGTAA |