| Protein Id: YP_009755884.1 |
Length: 978 aa |
| Description: spike protein Guangdong red-banded snake torovirus. |
Molecule type: linear |
| Data category: VRL |
Date: 12-Apr-20 |
| Source: Guangdong red-banded snake torovirus |
| Class virus: torovirus |
Virus name: Guangdong red-banded snake torovirus |
| Host: Lycodon rufozonatus |
Authors: Shi;M.; Lin;X.D.; Chen;X.; Tian;J.H.; Chen;L.J.; Li;K.; Wang;W.; Eden;J.S.; Shen;J.J.; Liu;L.; Holmes;E.C. and Zhang;Y.Z. |
| Title: The evolutionary history of vertebrate RNA viruses |
Journal: Nature 556 (7700); 197-202 (2018) |
| Taxonomy: Guangdong red-banded snake torovirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Torovirinae; Torovirus; unclassified Torovirus. |
| db_xref: """taxon:2116384, GeneID:54124764""" |
| Sequence: MNILILACFVPTLAYYEDWDKSILAINATDYINSISKLGTLLQNPHPVDHVNLPVKLDVLQEMLQKYNLYGKKQAIHTYQGSTLKYYNTYPGSVSVVHSSTNISQVSITRGRISLAVACNASIVKIDNIHYLDPRQHLAIRTFRNKSNPSYTCKDYNKVNYTTRKSSSKSYAVDLTTGYSIELQRLNIPQNYTNNSCYDDYKRFECASVMCNETLIAGKNKNKEYDFKVFRCFLKTDNQNYKRITVKADKKVETIRHTCHSPTGCITIIDAKPILTIIDNVIVDAPKTATDINYLRQVSLGYAAQMSNHVWYCPKWSLPFYLDFIYKSKTKEQYDACGYRVIQSTYKQFSNGDVEPSSSNLKYYFFTSQFEMYYFSPLGLLTVPFVYSAAPKQHKPLIVSFGTPLSINYVPPAVVVRSGQKFVDFGQVNGTQLYGPDPQFVSGTTTLLPTKGSCQYKSGYFFRGSFEVVPKQGIPLCGPADHLPMLKTCYSSKLQPDRITVFAQKRLWMPPVSCITLCENPLKCTNQETVSPYYQACVLIATQINELTGNKGAPLGLPVDSSLSSYLFNATKYVNFTQEVVKVQEISAIKPLNNALKKIDILRQRLRPLRGGGPVSVDPSFFLDIWSEGQYNAPSDMNWVAAFPWLSGWRFGRQINTLNYAMVAVVDALTDYVPKLNKNFQYISAVLSSVSTQATTNYKSITQLYNNFKSSYSDLTKEINNIKLQLARDQYMAAKVATLNNLYTQVVSAKATIETDIKLFAIKRDQCRGRAFGCTGNAGTYLFHSEIETEDYLQLIISYLRPVNCSFLYQTSSFCLYNVLYVPPFPCIIQSKDIPNQPSDLQYINMTDGKECQLEVLKISGCDQTPEFTDAVKFVNLFDSQIIRPNVSITNLQFNEKIGNITGFFQGVKSLVSGIEFLKDPSQYFNDTVNRYYDAIFSNSNDWSFLDYLKVALVALLILLLLPIIIPIVQSCFSCCRR |
Nucleotide
| Nucleotide_Id: NC_046963.1 |
Length: 2937bp |
| Description: Guangdong red-banded snake torovirus strain LPSF30546 1ab protein; spike protein; hypothetical protein; and putative glycoprotein genes; complete cds |
Source: Guangdong red-banded snake torovirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 12-Apr-20 |
| Class virus: torovirus |
Virus name: Guangdong red-banded snake torovirus |
| CDS: NC_046963.1:23089..26025 |
Host: Lycodon rufozonatus |
| Authors: Shi;M.; Lin;X.D.; Chen;X.; Tian;J.H.; Chen;L.J.; Li;K.; Wang;W.; Eden;J.S.; Shen;J.J.; Liu;L.; Holmes;E.C. and Zhang;Y.Z. |
Journal: Nature 556 (7700); 197-202 (2018) |
| Title: The evolutionary history of vertebrate RNA viruses |
db_xref: taxon:2116384; GeneID:54124769; GeneID:54124769; GeneID:54124764; GeneID:54124764; GeneID:54124765; GeneID:54124765; GeneID:54124766; GeneID:54124766; GeneID:54124767; GeneID:54124767; GeneID:54124768; GeneID:54124768 |
| Taxonomy: Guangdong red-banded snake torovirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Torovirinae; Torovirus; unclassified Torovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(30859); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(620); ExactPosition(23092); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(620); ExactPosition(16172); strand=1); FeatureLocation(ExactPosition(16171); ExactPosition(23092); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(23088); ExactPosition(26025); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23088); ExactPosition(26025); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26000); ExactPosition(26684); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26000); ExactPosition(26684); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26901); ExactPosition(27555); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26901); ExactPosition(27555); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27554); ExactPosition(28028); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(27554); ExactPosition(28028); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28139); ExactPosition(30185); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28139); ExactPosition(30185); strand=1); type='CDS') |
| Sequence: ATGAATATCCTAATCTTAGCTTGCTTCGTTCCAACATTAGCATACTACGAAGATTGGGATAAAAGTATTCTTGCAATCAATGCGACAGACTATATAAATTCCATCTCCAAACTAGGAACCCTTTTACAAAATCCCCACCCAGTCGACCACGTCAATCTACCAGTAAAACTAGATGTACTGCAAGAAATGCTCCAAAAATACAACTTATACGGCAAGAAACAAGCTATTCATACCTATCAAGGATCAACACTAAAATACTACAATACTTACCCTGGTTCCGTTTCGGTTGTCCACTCCAGTACCAATATTTCTCAGGTTTCTATAACTAGGGGTCGAATTTCACTAGCAGTGGCCTGTAACGCTTCAATAGTAAAAATAGACAACATACACTACCTCGACCCGAGGCAACATTTAGCAATTAGAACTTTCAGGAACAAGTCGAATCCTTCCTACACGTGCAAAGACTACAACAAGGTCAATTACACGACCAGAAAGTCGTCAAGCAAATCTTATGCGGTCGACCTTACAACTGGTTACTCAATTGAACTCCAAAGGCTGAACATACCTCAAAACTACACAAATAATAGTTGCTATGATGACTACAAAAGATTCGAATGTGCCTCAGTCATGTGTAATGAAACACTCATAGCAGGTAAAAACAAAAACAAGGAATACGACTTCAAAGTCTTCCGGTGTTTCCTAAAAACTGACAACCAAAACTACAAAAGAATAACTGTCAAAGCAGACAAGAAGGTAGAAACAATTCGACACACCTGCCATTCTCCAACTGGCTGCATCACCATTATCGATGCAAAACCAATTCTTACCATAATCGACAACGTCATCGTCGATGCTCCTAAAACGGCAACTGACATCAACTACCTACGTCAGGTTTCACTTGGCTATGCAGCTCAAATGTCCAACCACGTTTGGTATTGTCCAAAGTGGTCTCTACCATTCTATCTCGACTTCATCTACAAATCCAAGACCAAGGAGCAGTATGACGCTTGTGGCTACAGAGTTATTCAATCTACATACAAACAGTTTAGTAACGGTGATGTAGAACCCAGTTCAAGCAACCTCAAATACTACTTCTTCACGTCTCAATTTGAGATGTACTATTTTTCACCCCTTGGTCTGCTCACTGTGCCTTTTGTCTACTCCGCAGCTCCGAAACAGCACAAACCGCTCATCGTGAGTTTCGGTACACCCCTCTCCATCAACTACGTACCACCTGCAGTTGTTGTTCGTAGTGGACAAAAATTTGTGGATTTTGGACAGGTCAATGGTACACAGCTTTACGGGCCAGACCCACAATTCGTTTCCGGTACCACGACCCTCTTGCCAACAAAGGGTTCCTGCCAATACAAATCTGGCTATTTCTTTCGAGGTTCGTTTGAAGTTGTTCCCAAACAGGGCATTCCACTCTGTGGCCCAGCCGACCACCTACCAATGCTCAAAACGTGTTACAGCAGTAAACTTCAGCCAGACCGCATTACAGTCTTCGCTCAAAAAAGGCTTTGGATGCCACCAGTCTCTTGTATTACACTATGTGAAAATCCTCTTAAGTGTACAAATCAGGAGACTGTTAGTCCTTATTATCAGGCCTGCGTGCTTATTGCTACCCAAATCAACGAACTCACCGGTAACAAGGGTGCCCCATTGGGACTTCCCGTAGATAGTTCTCTCTCATCCTACCTCTTCAACGCCACCAAGTACGTCAACTTCACTCAAGAGGTAGTTAAAGTTCAGGAAATTTCTGCAATCAAGCCGCTCAACAACGCACTCAAGAAGATCGACATTCTTCGGCAGAGGCTTAGGCCCCTCCGTGGAGGTGGTCCTGTTAGTGTCGACCCCAGCTTCTTTCTGGACATCTGGAGCGAAGGTCAGTATAACGCACCATCTGACATGAACTGGGTAGCAGCCTTCCCCTGGCTTTCTGGCTGGCGATTCGGCCGACAAATCAATACACTCAACTACGCAATGGTTGCCGTTGTGGACGCCCTTACTGATTACGTTCCAAAACTCAACAAGAACTTTCAGTACATTTCTGCTGTTCTCTCTTCTGTTTCAACTCAAGCCACCACCAACTACAAATCAATCACTCAGCTCTACAACAACTTCAAGTCATCGTATTCAGATTTAACAAAAGAGATTAACAACATCAAGCTCCAACTCGCACGAGACCAGTATATGGCAGCCAAGGTCGCAACCCTCAATAATCTATACACTCAAGTAGTCAGTGCCAAGGCAACCATTGAGACCGACATCAAGCTCTTTGCAATCAAGAGAGATCAGTGTAGAGGCAGGGCTTTTGGTTGTACAGGCAATGCAGGTACTTACCTCTTTCATTCCGAGATTGAAACTGAGGACTATCTACAACTAATCATCTCTTATCTCCGACCTGTCAACTGTAGCTTTCTCTATCAGACATCATCTTTCTGTCTCTACAACGTTCTCTACGTGCCACCTTTTCCGTGTATCATCCAATCGAAAGACATCCCGAATCAACCAAGTGACCTCCAGTACATCAACATGACTGACGGAAAGGAATGTCAGTTGGAGGTCCTTAAGATCTCCGGTTGCGATCAAACCCCTGAATTCACCGATGCAGTCAAATTCGTTAACCTTTTCGACAGCCAAATCATAAGACCGAACGTCTCAATTACCAACTTGCAGTTCAATGAGAAAATCGGAAACATTACTGGCTTCTTTCAAGGAGTTAAGTCATTGGTTAGTGGTATCGAATTCCTAAAAGATCCATCACAGTACTTCAACGACACTGTTAACAGATACTACGATGCAATTTTCAGCAATAGCAATGATTGGTCCTTTCTCGACTATCTTAAGGTTGCATTGGTGGCATTGCTAATACTCTTGCTACTACCAATAATTATTCCAATCGTCCAGTCATGCTTTTCATGCTGTCGCCGCTAA |